It's from within, via the RetroPie menu.

EDIT Looks like it got past the stall by exiting ES and running the setup manually. Might be something to add to the setup script when updating ES to say something like "This must be ran outside of ES."

Thank you for the reply, appreciate it. I think I have a faulty controller, It worked once on OpenEMU as I tried it on that to see if that worked, but after just showing up once in settings it no longer does. I think i'll have to try a new N64 pad I think :(

@meleu Ugh. Of course. My apologies. I'll see if I can edit. Done!

@journeyman when binding the 'start' button will be your p1 start, and the select button will be your coin button. i don't know any shootemups that use more than 4 buttons.

Update for any future google searchers. I installed Ubuntu 16.04 and everything is working fine, I don't have a particular need to be on 17.04 but it would be nice to know why it is having issues for me. I'm still open to suggestions but in the meantime I’ll stick with 16.04 for now.

I am online let me know.

I did another install run to get the log files and it installed. No idea what changed but it's working fine now. Thanks for your help anyway.

@pjft Thanks! I am using 8bitdo FC30s, and in all my searching, somehow never came across that thread. Will look into it! My benchmark was being able to play Mike Tyson's Punchout, although in reality I could never beat that game even when I was a kid :)

@tmntturtlguy It's a zero.

The post [Tutorial] Installing Munt (MT-32 emulation) on RPi 3 might be interesting regarding this topic.

The post [Tutorial] Installing Munt (MT-32 emulation) on RPi 3 might be interesting regarding this topic.

@nowarrivinghere i never got it to ever work either. Advmess is a pain and i only got a handful of systems running on that one.

@bollwerk they do work.

There's a post from several months back detailing how to get the One S controller working on the Pi3 using bluetooth.

https://retropie.org.uk/forum/topic/6198/xbox-one-controller-via-bluetooth/22

There's a bug in the stock Debian compiler which causes a build error; see #2099 and #2074.
@herb_fargus ^

That's a shame. I was hoping it was something I could fix on my own. I do love my Japanese computers. I'm glad to see that an official Retropie guide for the PC-88 emulator showed up within the past few months at least.

@tmntturtlguy I imagine you could install another copy. I don't know the exact commands, but this page would get you close:

https://buildbot.libretro.com/docs/compilation/ubuntu/

Which core files did you change to make your normal arcade setup work?

Im beginning to think its an issue with either retroarch or raspian itself on how its reading streamed data from a disk. It seems to happen when trying to read music or a video. Not only am i getting pauses and stops in pix games, but also sega cd games. hmmm