Great to hear that it has solved the issue.
Yes you can poke around in the files to see if the theme has support for ti99.
All themes are on github.
So for example our theme 'DTEAM-1 cygnus-blue-flames' can be found over here :
https://github.com/DTEAM-1/cygnus-blue-flames
This is the same for all themes.
Just look at the file esthemes.sh for themes in :
/home/pi/RetroPie-Setup/scriptmodules/supplementary/esthemes.sh
or :
https://github.com/RetroPie/RetroPie-Setup/blob/master/scriptmodules/supplementary/esthemes.sh